In 1997 she had her debut at the Swedish theater Dramaten, in the play Yvonne by Ingmar Bergman. Her screen debut was in the movie Kvitebjørn Kong Valemon (directed by Ola Solum, 1991). Her big breakthrough came with the movie Jerusalem (directed by Bille August, 1997), and among her later movies are Insomnia (1997), Øyenstikker (Dragonfly, 2001) and Syndare i Sommarsol (2001). For the movie Jeg er Dina (I Am Dina, 2002) she received a prize for best foreign actress at the Montreal International Film Festival. In 2002 she was named one of European film's Shooting Stars by European Film Promotion.

In 1999 she acts as Olga in The 13th Warrior. In 2004 she appeared in the Swedish film Dag och natt directed by Simon Staho.

In 2007 she played female lead in the Russian film The Banishment directed by Andrey Zvyagintsev.

The Karlovy Vary International Film Festival (KVIFF) invited Bonnevie to join the Grand Jury of the Festival's 44th edition in 2009.